Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943843.1_cds_XP_016486812.1_77615
CDS Infomation

[gene=LOC107807048] [db_xref=GeneID:107807048] [protein=DEAD-box ATP-dependent RNA helicase 24-like] [protein_id=XP_016486812.1] [location=complement(join(4612..4663,4783..5137,5358..5397,6726..7954,8927..9539))] [gbkey=CDS]
Sequence

ATGTCGAAGAGAAAATTCGGATTCGAAGGATTTGGAATAAATAAGCAAACGACGTACAAC
TTCGAGCGAAATCAAGCTCCTCAGCGACTGTACGTCCCGCCGTCGTTATGCTCCGGCGGT
AGCCACGACAATTACGAAGACACCGACTTAGATAACATCGAGTACGAAGAACACGATGCG
GTCGGAGAGGACAACAAAAACGATGGTGCAGGAGGAGGAGGCGGCGCCGAAGATGATGAG
ATCGATCCGCTCGATGCATTTATGGAAGGGATTCATGAGGAAATGAAGGCGGCGGCGCCT
CCGAAGCCGAAGGAGAAGCTTGATAAGTATAAGGATGATGTAGAGGATGATCCGATGGAG
AGTTTTTTAAGAGCGAAGAAGGACGTAGGGTTACAATTGGCTGCTGAAGCTCTTAACGCT
GGTTATAATTCGGACGAGGAGGTTTATGCTGCGGCGAAAGCTGTTGATGCAGGATTGGTT
GAGTATGACTCTGATGATAATCCTATTGTTGTTGATAAAAAGAAGATTGAACCTATTCCT
GCTTTGGAACATAGTGAGATTGACTATGAAGCCTTCAACAAGGACTTTTACGAGGAAAAG
CCTTCTATTTCAGGTATGAGCGATCCGGAAGTTAATGAATATAGGTCAAGCTTGGCAATT
CGTGTATCAGGCTTTGATGTTCCAAGGCCTGTTAAGACATTTGAAGACTGTGGTTTTTCA
GTTGAGTTGATGAAAGCTATCAGTAAACAGGGATATGAGAAGCCTACACCAATACAGTGT
CAAGCATTGCCGATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCC
GGCAAGACTGCTGCTTTTGTGCTTCCTATGGTTGTCCACATTATGGATCAGCCTGAACTT
CAGAAAGAAGAAGGTCCCATTGGAGTTATTTGTGCACCTACTAGGGAATTAGCACATCAA
ATATTTGTGGAGGCAAAGAAATTCTCTAAATCGCATGGTATCCGTGTCTCTGCAGTTTAT
GGAGGAATGTCTAAATTGGATCAATACAAAGAACTAAAGGCTGGATGTGAGATTGTTGTT
GCTACTCCAGGGAGGTTGATAGATATGCTTAGAAAGAAGGCATTTACAATGTTGAGGGCA
ACTTACCTAGTACTTGATGAGGCTGATCGGATGTTTGACCTTGGTTTTGAGCCTCAGATA
AGGTCCATTGTCGGTCAAATTAGACCTGATCGTCAAACATTGCTCTTTTCAGCAACTATG
CCCCGCAAAGTTGAAAAGCTTGCCAGAGAAATATTGACAGATCCTGTAAGAGTTACCGTG
GGTGAGATTGGCATGGCTAATGAGGATATTACACAATTAGTTCAAGTGATTCCTTCGGAT
GCTGAAAAATTGCCTTGGCTTTTGGAAAAGCTCCCTGTACTGATCGACAATGGTGATGTT
CTTGTCTTTGCTTCGAAGAAGGCAACAGTGGATGAGATTGAATCTCAACTGGCTCAGAAG
GGATTCAGAGTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTATGGAGACACTG
CAAAAGTTTAAATCTGGCATATATCATGTTCTTATCGCAACTGATGTTGCTGCCCGTGGT
CTTGACATCAAATCAATTAAGTCAGTGGTGAACTATGACATAGCTAAAGATATGGACATG
CATGTTCACAGAATTGGGAGAACAGGTCGTGCTGGTGACAAAGATGGGACGGCCTACACT
CTTATTACACAGAAGGAAGCGCGTTTTGCTGGTGAACTGGCGAACAGTTTGGTTGCTGCC
GGTCAAACTGTGTCCATCGAACTAATGGACCTTGCTATGAAGGATGGGAGGTTCCGGTCC
AAAAGGGATGCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAGCAAT
AGAGGTGTACGAGGTGTGGATTTTGGTCTAGGTATTGGATACAATTCTGAATCAAATAAC
CCTCCCCAGAACACTGCTCCAAGCCGTTCTGCAGCAGTTAATTCCCTGAGGACAGGCATG
ATGGCACAATTTAAAAGTAGCTTTGTTGCTGCATCATCAAATTCTCAAAATCAAGGGATG
AACAACACAGCTGGTGCGTATCCGAACAAGGGAATGGTCTTACAGGGCTTCGTCTCTGGT
GGGACAATTGGTGGAGAAAGTAATGCTTCCCGTATTAGTTCCACATTTACTGGAGCTAAC
CAGAAGAGTTCAGAGAGTTCAAAAGAGAAGTCTAGAGAAAGACGGAGGCCTTCTGGTTGG
GATCGTTGA

Peptide Sequence

PEP ID

XP_016486812.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Nicotiana tabacum]
Sequence

MSKRKFGFEGFGINKQTTYNFERNQAPQRLYVPPSLCSGGSHDNYEDTDLDNIEYEEHDA
VGEDNKNDGAGGGGGAEDDEIDPLDAFMEGIHEEMKAAAPPKPKEKLDKYKDDVEDDPME
SFLRAKKDVGLQLAAEALNAGYNSDEEVYAAAKAVDAGLVEYDSDDNPIVVDKKKIEPIP
ALEHSEIDYEAFNKDFYEEKPSISGMSDPEVNEYRSSLAIRVSGFDVPRPVKTFEDCGFS
VELMKAISKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQPEL
QKEEGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVV
ATPGRLIDMLRKKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM
PRKVEKLAREILTDPVRVTVGEIGMANEDITQLVQVIPSDAEKLPWLLEKLPVLIDNGDV
LVFASKKATVDEIESQLAQKGFRVAALHGDKDQVSRMETLQKFKSGIYHVLIATDVAARG
LDIKSIKSVVNYDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELANSLVAA
GQTVSIELMDLAMKDGRFRSKRDARKGGGKRAKGRGGGSNRGVRGVDFGLGIGYNSESNN
PPQNTAPSRSAAVNSLRTGMMAQFKSSFVAASSNSQNQGMNNTAGAYPNKGMVLQGFVSG
GTIGGESNASRISSTFTGANQKSSESSKEKSRERRRPSGWDR

Transcript Sequence

Gene sequence data has not been registered.